Software
The Heit lab has produced a number of software-based packages for image analysis, mostly in Matlab. Below are the packages which we have published.
MIiSR:
Molecular Interactions in Super Resolution (MIiSR) is our published super resolution image analysis package. This software package allows for the quantification of intermolecular interactions and the formation of higher-order molecular structures in super-resolution images. Downloads of the original version and new versions are available from this link.
Super-Resolution Image Analysis Scripts (Matlab)
Spatial Association Analysis (SAA): Matlab scripts used to analyze inter-molecular interactions within super-resolution images. Download includes scripts for assessing interactions between two and three sets of molecule, as well as files for converting particle position file formats and for identifying repeat detection of the same fluorophore. This package is replaced by MIiSR.
Random Matlab Code
Random code snipits used in the lab for various purposes. Code quality and documentation will not be upto the standard of code provided as part of publications. Use this code at your own risk!.